The Shape of Light
Ernst Haeckel's drawing of diatom shells: a radial disc at the centre surrounded by elongated and chained shells, every one covered in fine rows of pores, white on black.
Diatoms, from Ernst Haeckel's Kunstformen der Natur, 1904. Public domain. Haeckel drew what he saw, and what he was sure was there.

A drop of pond water holds shells of glass more intricate than any cathedral window. Under a good lens their outlines are crisp, and it is easy to believe you are seeing all of them.

Chapter 2 · Specimen and instrument

What the Objective Caught

A diatom under a good lens. What can the microscope show of its finest markings, and what changes when only the lamp moves?

Look first

A shell made of glass

This is a diatom valve: one half of the glass shell of a single-celled alga, about twenty micrometres long. A rib runs down its middle, swelling at the centre and at each end. Across its face run fine ridges called striae, like the rungs of a ladder.

The striae are half a micrometre apart: twenty in every ten micrometres, which is how diatomists count them. That is roughly the wavelength of green light, and it is the whole subject of this chapter.

Your photograph: a diatom whose striae appeared, or failed to appear, as you changed objective or condenser. Note the objective, its NA, the condenser setting and any filter.
observed
Photograph slot.
synthetic model specimen
What the light meets, as the model defines it. Brighter means more light gets through. This is not what any microscope would show.

Enlarge the view. Above ×1 it centres on the face of the valve, between the rib and the rim.

Your note, to be writtenOne or two sentences, in your own words, about a moment at your own microscope when the image looked sharp and still was not telling you what you thought it was. This is the only place in the exhibition written in the first person.

Commit to a prediction

Put it under a good objective

A dry 40× objective with a numerical aperture of 0.65: a good, ordinary lens, free of aberrations and perfectly focused. A green filter, 550 nanometres. The condenser below the stage closed to a pinpoint, so the light comes straight up the axis. The eyepiece magnifies as much as you like.

Across the face of the valve, what will you see?

Why the first guess made sense

The blur picture, and where it holds

If you chose B, you were reasoning the way the pinhole taught. Every point of the object spreads into a small patch in the image. Bring two points close and their patches overlap; closer still, and the gap between them fills in. Detail fades.

That picture is right in its place. Helmholtz built the microscope’s theory this way in 1874, treating each point of the object as if it glowed on its own. It describes stars, the sunlit chart of chapter 1, and a fluorescent cell, where every stained molecule shines independently.

It fails here for one reason. This diatom does not glow. It is lit from below by a single narrow beam, so every point of the valve is lit in step with every other. In the pinhole, waves added as waves only within the patch from one point. Here, the light from neighbouring points adds as waves too, before anything becomes brightness.

The mechanism

Beams, and which ones get in

Ernst Abbe, working for Carl Zeiss in Jena, published the better account in 1873. A row of evenly spaced striae acts like a diffraction grating. Most of the light goes straight on, but some leaves at definite angles to either side, in separate beams. The finer the spacing, the steeper the angle.

The objective accepts a cone of directions; its numerical aperture says how wide. Inside the microscope the beams that got in meet again and interfere. The stripes in an image of a grating are those interference fringes, rebuilt from whichever beams were caught.

For striae half a micrometre apart in green light, the side beams leave more steeply than this objective accepts. Only the straight-through beam gets in, and one beam cannot make fringes. Not blurred. Empty.

Beams from a grating and the objective’s cone Light enters the striae from below. A straight-through beam and two side beams leave them. The objective accepts only a cone of directions. For striae 0.50 micrometres apart in 550 nanometre light, the side beams fall outside the cone of a 0.65 objective.
Angles drawn as they are inside the mountant. A direction sine above 1.0 can travel in glass, but cannot reach a dry lens.

The bench

Take the microscope apart

An endless row of striae, in one dimension. At the top, the beams leaving it and the band the objective accepts; in the middle, the specimen and the image; at the bottom, both as strips of light. It opens on opaque bars a micrometre apart, so the stripes come out bold: honest about whether stripes appear and at what spacing, generous about how bold they look.

Beam directions · back focal plane

Specimen and image, across four micrometres

Specimen

Image

Block a beam (Abbe’s stop in the back focal plane)
Unlocks after the case you have not seen.
0 is a pinpoint. Opened, light arrives from many directions that do not keep step.

Things to try

  1. Drag the spacing slowly from 1.00 down to 0.80 µm. Note where the stripes disappear. It is not a fade.
  2. Back at 1.00, look in the middle of each dark bar of the image: a faint bright line the specimen does not have.
  3. At a spacing that shows no stripes, change the colour. Which way brings them back?
  4. Block the straight-through beam, order 0. Count the image’s stripes against the specimen’s.

What you can now say

Fine regular structure splits light into a few beams at definite angles. The image is what the beams the lens catches make when they meet again. When the side beams miss the lens, no magnification brings the structure back.

With light from a single direction the cutoff is sharp, not a fade. Getting the beams in is necessary, not sufficient: nearly clear striae can be resolved and still be hard to see. And a few beams can draw details the specimen lacks, like the bright line in each dark bar, or stripes at the wrong spacing.

For the determined reader: the calculation, a worked case, and its limits

The quantities

SymbolMeaningUnit
dstria spacingµm
λwavelength in vacuumµm
s = n sinθdirection of a beam, from the axis, in the medium where it travelsnone
NA = n sinαnumerical aperture: the largest s the objective acceptsnone
cmamplitude of beam m, from the specimen’s transmissionnone

The calculation

Light arriving with direction s0 leaves the striae in beams, and beam m reaches the image if |sm| ≤ NA:

sm = s0 + mλ/d,  m = 0, ±1, ±2, …

I(x) = | Σadmitted cm exp(i2πmx/d) |²

Writing directions as n sinθ makes the same rule hold in air, glass or oil. For opaque bars with clear gaps half the period wide, c0 = 0.500, c±1 = 1/π = 0.318, c±2 = 0. With light on the axis the first side beams get in only if λ/d ≤ NA, so the finest spacing shown is dmin = λ/NA. With the light tilted to the edge of the cone it is λ/(2NA); with a filled condenser, λ/(NA + NAcondenser).

A worked case

λ = 0.55 µm, NA = 0.65, light on the axis.

d = 1.00 µmd = 0.80 µm
λ/d0.5500.688
beams admitted0, ±10
image(0.500 + 0.637 cos 2πx/d)²0.250 everywhere
centre of a gap / of a bar1.292 / 0.01870.250 / 0.250

Because 0.637 exceeds 0.500, the amplitude passes through zero twice per period: two black lines per bar with a faint bright line between them, where the specimen is uniformly dark. My own hand calculation got this case wrong before the code was checked; the testing note records it.

What changes on screen. Raise λ and the side beams move outward; the cutoff spacing grows in proportion. Raise NA and the band widens; the cutoff shrinks in proportion. Change the bars’ width and the beams change strength but not direction, so the cutoff stays put. Here dmin = 0.846 µm: the stripes vanish between 0.85 and 0.84.

Where the model stops

It assumes a thin specimen that only dims the light, one plane wave of illumination unless the condenser is opened, a perfect lens at perfect focus, a specimen that repeats without end, and scalar light. Real silica mostly delays light rather than dimming it. The cutoff rule is the same for such a phase object, but at perfect focus with only beams 0 and ±1 its striae show almost no contrast, which is why they are often seen best slightly out of focus. The bench treats an opened condenser as a line of directions rather than a disc, so its numbers there are approximate.

The dispute

Brightness, or beams?

Abbe’s account was not obvious to the people who used microscopes most. It met resistance in England, where the Royal Microscopical Society argued about it for decades. Abbe had published few equations and no diagrams, and the first English translation was poor.

The live question was practical. Wide-aperture lenses, especially immersion lenses, gave brighter images. Was that all they gave? Francis Wenham, an influential English microscopist, is reported to have held that immersion added brightness but not resolution; J. J. Woodward and F. Mayall, comparing lenses on Nobert’s ruled test plates, are reported to have found otherwise.

The evidence that counted was a demonstration. In 1876 Abbe showed John Ware Stephenson, the Society’s treasurer, ruled gratings through an objective fitted with stops that blocked chosen parts of the diffraction pattern. Admit different beams, and the same grating gives different images. Stephenson reported it to the Society in January 1877. What a stop removes is not brightness but beams.

Twenty years later Lord Rayleigh, whom you met in chapter 1, found nature had run the experiment for him. A photographic copy of one of Nobert’s gratings, six thousand lines to the inch, showed twelve thousand, and stayed visible well out of focus. Through a sodium flame he saw why: the copy sent brilliant side beams and a feeble straight-through one. It had removed the central beam itself.

A case you have not seen

Same lens. Move the lamp.

The same diatom, the same 40×/0.65 objective, the same green light. One change: the condenser now sends its light in at a slant, tilted along the valve’s long axis at a direction sine of 0.55, about 33 degrees. The objective’s cone is exactly as wide as before.

What will you see across the face of the valve?

Where this explanation stops

A shell that glows

Everything here rested on one condition: light leaving the specimen in step, because it all came from one narrow beam. That made the side beams definite and the cutoff sharp.

Now stain the diatom with a fluorescent dye. Each molecule glows on its own schedule; no two keep step. Rayleigh saw the difficulty: a grating that glows on its own forms no diffraction beams at all. Yet the theory for glowing objects says the half-micrometre striae would now appear under the same lens, faintly. The blur picture from the pinhole returns, and here it is right.

The same striae, under the same lens, vanish when lit by one narrow beam and appear when the shell glows. What property of light decides between the two pictures, and can you set it anywhere in between?

End of chapter 2

Added to your notebook
Fine regular structure appears in an image only if at least two of its beams reach the lens. Magnification cannot bring back beams the lens missed.

When can light interfere with itself at all?

Chapter 3 · In Step